The paper addresses an issue of creating an environment favorable for the life in megacities by planting vegetation on the rooftops. It also provides information about rooftop greening practices adopted in other countries. The issues of ‘green roof’ building in climatic conditions of Saint Petersburg and roof vegetation impact on the urban ecosystem are examined. Vegetation composition quality- and quantity-wise has been proposed for the roof under research and a 3D model of this roof reflecting its geometric properties has been developed. A structure of roof covering and substrate qualitative composition is presented. An effect of rooftop geometry on the substrate temperature is explored. The annual substrate temperature and moisture content in different parts of the roof have been analyzed. Results of thermal imaging monitoring and insolation modelling for different parts of green roof surface are presented.